General concepts for PCR primer design.

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General concepts for PCR primer design.

1Division of AIDS, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland 20892; ZDepartment of Molecular Biology, Washington University, St. Louis, Missouri 63110; 3Department of Pathology, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814 PCR is a technology born of the modern molecular biology era. The enzyme used...

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PCR Primer Design

To make PCR a specific, efficient and cost effective tool for researchers and clinicians the most important aspect is oligonucleotide primer design. This review discusses various aspects of primer design. Advice is provided for optimal design and the role of bioinformatic tools is highlighted. The authors discuss theoretical considerations and compare computational and experimental studies.

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Primer1: Primer Design Web Service for Tetra-Primer ARMS-PCR

Tetra-primer ARMS-PCR is used extensively as a low cost, single PCR assay requiring no post-PCR manipulation. The design of successful primers depends on a number of variables such as melting temperatures, GC content, complementarity and selection of mismatch bases. The optimal selection of primers can be achieved in an automated way using a program which evaluates candidate primers for a given...

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Optimizing primer--probe design for fluorescent PCR.

TaqMan, a variation of fluorescent PCR, is a powerful tool for gene expression and polymorphism studies. Here we describe the design and evaluation of 27 new TaqMan primer-probe sets for rat genes that play a key role in neural signaling. These newly designed and synthesized probes were tested and then used for quantification of RNA isolated from rat brain. The usual length of common TaqMan pro...

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Microsequencing of myosins for PCR primer design.

Their large size and their relative resistance to proteolytic cleavage (1) make myosins particularly difficult substrates for the acquisition of their peptide sequences by standard protocols. For this reason, instead of identifying myosins first according to their biochemical activity and then obtaining their sequences, PCR and other DNA-based techniques exploiting the highly conserved sequence...

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ژورنال

عنوان ژورنال: Genome Research

سال: 1993

ISSN: 1088-9051

DOI: 10.1101/gr.3.3.s30